THE STUDY OF ORTHOPEDIA HOMEOBOX GENE EXPRESSION IN DIFFERENT TUMOR AND NORMAL HUMAN TISSUES
PDF (Русский)

Keywords

TUMOR SPECIFIC EXPRESSION
ORTHOPEDIA HOMEOBOX (ОТР)
ORTHOPEDIA HOMEOBOX (OTP)
TUMOR MARKERS
CANCER DIAGNOSTICS

How to Cite

Karnaukhova, Y., Polev, D., Krukovskaya, L., & Kozlov, A. (2017). THE STUDY OF ORTHOPEDIA HOMEOBOX GENE EXPRESSION IN DIFFERENT TUMOR AND NORMAL HUMAN TISSUES. Voprosy Onkologii, 63(1), 128–134. https://doi.org/10.37469/0507-3758-2017-63-1-128-134

Abstract

There was studied the OTP gene expression in different normal and tumor human tissues using PCR with specific primers. OTP gene is expressed in 23 of 29 tumor samples and intron fragment of OTP gene (sequence AI267901) is expressed in 49 of 59 tumor samples of different localization. Studied fragments of OTP gene are not transcribed in normal and embryonic tissues except for normal testis tissue, i.e. they can be classified as cancer-testis transcripts. According to preliminary data AI267901 RNA and OTP gene mRNA are transcribed from different DNA strands. Thus locus of OTP gene provides two independent tumor specific transcripts which are potential markers for the cancer diagnostics.
https://doi.org/10.37469/0507-3758-2017-63-1-128-134
PDF (Русский)

References

Baranova A.V., Lobashev A.V., Ivanov D.V. et al. In silico screening for tumour-specific expressed sequences in human genome // FEBS Lett. - 2001. - Vol. 508. - № I. - P. 143-148.

Chirgwin J.M., Przybyla A.E., MacDonald R.J., Rutter W.J. Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease // Biochemistry. - 1979. - V. 18. - № 24. - P. 5294-5299.

Joe W. Gray, Colin Collins. Genome changes and gene expression in human solid tumors // Carcinogenesis. - 2000. - Vol. 21. - № 3. - P. 443-452.

Kim MS, Lee J, Oh T, Moon Y., Chang E, et al. Genome-wide identification of OTP gene as a novel methylation marker of breast cancer // Oncol Rep. - 2012. - Vol. 27. - P. 1681-1688.

Kozlov A.P. Expression of evolutionarily novel genes in Tumors // Infectious Agents and Cancer. - 2016. - Vol. II. - № 34. - DOI: 10.1186/s13027-016-0077-6

Krukovskaja L.L., Baranova A., Tyezelova T. et al. Experimental study of human expressed sequences newly identified in silico as tumor specific // Tumour Biol.-2005. - V. 26. - № 1. - P. 17-24.

Lin X., State M.W., Vaccarino F.M., Greally J., Hass M., Leckman J.F. Identification, chromosomal assignment, and expression analysis of the human homeodomain-containing gene Orthopedia (OTP) // Genomics. - 1999. - Vol. 60. - № 1. - P. 96-104.

Nonaka D., Papaxoinis G., Mansoor W. Diagnostic Utility of Orthopedia Homeobox (OTP) in Pulmonary Carcinoid Tumors // Am J Surg Pathol. - 2016. - Vol. 40. - № 6. - P. 738-744.

Sambrook J., Russel D.W. Molecular cloning: a laboratory manual. 3rd ed. New York: Cold Spring Harbor Laboratory Press, Cold Spring Harbor, 2001.

Swarts D.R., Henfling M.E., Van Neste L. et al. CD44 and OTP Are Strong Prognostic Markers for Pulmonary Carcinoids // Clinical Cancer Research. - 2013. - Vol. 19. - P. 2197-2207.

Creative Commons License

This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.

© АННМО «Вопросы онкологии», Copyright (c) 2017